CFSAN-Biostatistics / shigatyper

CFSAN Shigella Typing Pipeline
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Incorporate patches from Bioconda #14

Closed rpetit3 closed 1 year ago

rpetit3 commented 1 year ago

This PR incorporates the patches and indexes from the Bioconda recipe. The addition of --outdir option and index files allow better support the automatic container creation on Biocontainers.

On the next release, I can update the recipe to remove the patches.

crashfrog commented 1 year ago

Accepted with gratitude!