CIAT-DAPA / subsets_genebank_accessions

Web tool which allows creating subsets of accessions based on indicators
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HUS003 - Build biotic indicators #4

Closed juangarc closed 3 years ago

juangarc commented 4 years ago

Description

As an administrator user, I want to be able build a set of biotics indicators for each accession, with which latterly the users will may to create GenBank accessions subsets from filters based in them.

Acceptance criteria

Stage 1 - Pest resistance: To create the pest resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators pest resistance and latterly him will run the script that build them.                                                      

Stage 2 - Disease tolerance: To create the disease tolerance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators disease tolerance and latterly him will run the script that build them.                                                                                                                                                   Stage 3 - Seed color:  To create the seed color indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators seed color and latterly him will run the script that build them.                                                                                                              

Stage 4 - Growth habit: To create the growth habit indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators growth habit and latterly him will run the script that build them.                           

Stage 5 - Root color: To create the root color indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators root color and latterly him will run the script that build them.                                                                                                              

Stage 6 - FOC-TR4 resistance: To create the FOC-TR4 resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators FOC-TR4 resistance and latterly him will run the script that build them.                  

Stage 7 - Black sigatoka resistance: To create the black sigatoka resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators black sigatoka resistance and latterly him will run the script that build them.                                                                                                                                                                                           
Stage 8 - Rust resistance: To create the rust resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators rust resistance and latterly him will run the script that build them.                                                                                                                                                                                           
Stage 9 - Wheat blast resistance:  To create the wheat blast resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators wheat blast resistance and latterly him will run the script that build them.                                                                                                                                                                                           
Stage 10 - Tar spot resistance:  To create the tar spot resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators  tar spot resistance and latterly him will run the script that build them.                                                                                                                                                                                          
Stage 11 - Septoria tritici resistance:  To create the Septoria tritici resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators Septoria tritici resistance and latterly him will run the script that build them.                                                                                                                                                                                           
Stage 12 - Leaf blight resistance:  To create the leaf blight resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators leaf blight resistance and latterly him will run the script that build them.                                                                                                                                                                                          
Stage 13 - SPFMV resistance: To create the SPFMV resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators SPFMV resistance and latterly him will run the script that build them.                                                                                                                                                                                          
Stage 14 - Begomovirus resistance:  To create the begomovirus resistance indicator for each accession the administrator user must have a file,  once him had filled out it, the administrator user will proceed to select it in the section biotic indicators begomovirus resistance and latterly him will run the script that build them.                                                                                                                                                                                          

Stage 15 - Blast resistance: To create the blast resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators blast resistance and latterly him will run the script that build them.                                                                                                                                                                                          
Stage 16 - BLB resistance: To create the BLB resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators BLB resistance and latterly him will run the script that build them.                                                                                                                                                                                          
Stage 17 - RYMV resistance: To create the RYMV resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators RYMV resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 18 - Leaf rust resistance:  To create the leaf rust resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators leaf rust resistance and latterly him will run the script that build them.                                                                                                                                                                                          } Stage19 - Yellow rust resistance: To create the yellow rust resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators yellow rust resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 20 - Stem rust resistance: To create the stem rust resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators stem rust resistance and latterly him will run the script that build them.                                                                                                                          Stage 21 - Powdery mildew resistance: To create the powdery mildew resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators powdery mildew resistance and latterly him will run the script that build them.                                                                                                                                                                                            Stage 22 - Net blotch resistance: To create the net blotch resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators net blotch resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 23 - Ascochyta blight resistance: To create the ascochyta blight resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators ascochyta blight resistance and latterly him will run the script that build them.                                                                                                                                                                                Stage 24 - Orobanche resistance: To create the orobanche resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators orobanche resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 25 - Leaf miner resistance: To create the leaf miner resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators leaf miner resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 26 - Wilf resistance: To create the wilf resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators wilf resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 27 - Downy mildew resistance: To create the downy mildew resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators downy mildew resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 28 - Shoot fly resistance: To create the shoot fly resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators shoot fly resistance and latterly him will run the script that build them.                                                                                                                                                                                           Stage 29 - Stem borer resistance: To create the stem borer resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators stem borer resistance and latterly him will run the script that build them.                                                                                                                                                                                                     Stage 30 - Pod borer resistance: To create the pod borer resistance indicator for each accession the administrator user must have a file, once him had filled out it, the administrator user will proceed to select it in the section biotic indicators pod borer resistance and latterly him will run the script that build them.                                                                                                                          Stage 31 - Successful operation:** For each stage, if the operation flow is successful the system shows a message indicating it.                                                                                                                                                          

Stage 32 - Failed operation: For each stage, if the file structure isn't correctly, the system will show an exception with the message: "The file structure isn't correct."                                                             

Stage 33 - Missing value: For each stage, if the file has a column without value, the indicator for this accession won't create.                                                                                                                                                                                                                                                                                     Stage 34 - Generate logs file:  For each stage the system will generates a log file, which is described in the HUS007.

juangarc commented 3 years ago

We haven´t a lot of information about this indicator.