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CIDARLAB / MINT

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Cell traps #11

Closed dinithi-s closed 7 years ago

dinithi-s commented 7 years ago

Cell traps do not work in fluigi, might be a coding issue but we can't get them to appear on our final chip designs

aonanam commented 7 years ago

They should work okay - when I run Fluigi using MM-created MINT files Fluigi gets through it. Here's an example MINT file which includes a cell trap:

# .uf output by muShroomMapper 3D DEVICE OneInValveSerpValveTrapFourOut

LAYER FLOW

PORT flowInPort0,outPort0,outPort1,outPort2,outPort3 r=2020;

H MIXER fDevice0_SerpMixer numBends=5 bendSpacing=1000 bendLength=2000 channelWidth=1000; H LONG CELL TRAP fDevice1_CellTrap numChambers=6 chamberWidth=1000 chamberLength=1000 chamberSpacing=1000 channelWidth=1000; V TREE fDevice2_SplitTree 1 to 4 spacing=10000 flowChannelWidth=1000;

H 3DVALVE cDevice0_3DValve radius=2000 gap=1000; H 3DVALVE cDevice1_3DValve radius=2000 gap=1000;

CHANNEL flowChannel0 from flowInPort0 2 to cDevice0_3DValve 4 w=1000; CHANNEL flowchannel1 from fDevice2_SplitTree 2 to outPort0 4 w=1000; CHANNEL flowchannel2 from fDevice2_SplitTree 3 to outPort1 4 w=1000; CHANNEL flowchannel3 from fDevice2_SplitTree 4 to outPort2 4 w=1000; CHANNEL flowchannel4 from fDevice2_SplitTree 5 to outPort3 4 w=1000; CHANNEL flowChannel5 from cDevice0_3DValve 2 to fDevice0_SerpMixer 1 w=1000; CHANNEL flowChannel6 from fDevice0_SerpMixer 2 to cDevice1_3DValve 4 w=1000; CHANNEL flowChannel7 from cDevice1_3DValve 2 to fDevice1_CellTrap 1 w=1000; CHANNEL flowchannel8 from fDevice1_CellTrap 2 to fDevice2_SplitTree 1 w=1000;

END LAYER

LAYER CONTROL

PORT controlInPort0,controlInPort1 r=2020;

CHANNEL controlChannel0 from controlInPort0 1 to cDevice0_3DValve 3 w=1000; CHANNEL controlChannel1 from controlInPort1 3 to cDevice1_3DValve 1 w=1000;

END LAYER

aonanam commented 7 years ago

Let me know if that file works out for you. Hopefully it's just a MINT syntax issue.

aonanam commented 7 years ago

Closing this issue. Sarah made the same issue on the Fluigi repo, and the thread being over there makes more sense to me. Will copy my reply over there.