search

CIDARLAB / cello

Genetic circuit design automation
http://www.cellocad.org/
BSD 2-Clause "Simplified" License
801 stars 133 forks source link

NetSynth Bug on Linux #38

Open scvannost opened 6 years ago

scvannost commented 6 years ago

I'm trying to run Cello on Ubuntu 16.04LTS, and netsynth.Utilities.getFileContentAsStringList() is throwing a FileNotFoundException on results/user/demo001/netSynth/abcOutput.bench. This happens on both the local web app and using the API. It's reporting the error as "Error in abstract circuit." from line 235 in DNAcompiler.run().

Compiling using Maven; JDK7

tim-tx commented 6 years ago

Can you confirm that you created a results folder mirroring the name of the source directory, as documented in INSTALL.md?

scvannost commented 6 years ago

Yes I did. It's creating the netSynth folder in the results as well.

emernic commented 6 years ago

I have encountered this issue as well, also on Ubuntu.