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CIRDLES / Tripoli

Tripoli imports raw mass spectrometer data files and supports interactive review and archiving of isotopic data. Tripoli facilitates visualization of temporal trends and scatter during measurement, statistically rigorous filtering of data, and calculation of statistical parameters.
http://cirdles.org/Tripoli/
Apache License 2.0
8 stars 12 forks source link

Tripoli crashes when trying to open new analysis #236

Closed joneelzinto closed 1 month ago

joneelzinto commented 2 months ago

Tripoli Version: 0.5.1 Java Version: 21.0.3 JavaFX Version: 21.0.3+1 OS: Windows 10 10.0

Issue details: Opened Tripoli and went to the 'Analysis tab' and clicked on 'New Analysis' and received an error message in the command terminal:

Tripoli Resources loaded Exception in thread "JavaFX Application Thread" java.lang.RuntimeException: java.lang.reflect.InvocationTargetException at javafx.fxml/javafx.fxml.FXMLLoader$MethodHandler.invoke(Unknown Source) at javafx.fxml/javafx.fxml.FXMLLoader$ControllerMethodEventHandler.handle(Unknown Source) at javafx.base/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventUtil.fireEventImpl(Unknown Source) at javafx.base/com.sun.javafx.event.EventUtil.fireEvent(Unknown Source) at javafx.base/javafx.event.Event.fireEvent(Unknown Source) at javafx.controls/javafx.scene.control.MenuItem.fire(Unknown Source) at javafx.controls/com.sun.javafx.scene.control.ContextMenuContent$MenuItemContainer.doSelect(Unknown Source) at javafx.controls/com.sun.javafx.scene.control.ContextMenuContent$MenuItemContainer.lambda$createChildren$12(Unknown Source) at javafx.base/com.sun.javafx.event.CompositeEventHandler$NormalEventHandlerRecord.handleBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(Unknown Source) at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source) at javafx.base/com.sun.javafx.event.EventUtil.fireEventImpl(Unknown Source) at javafx.base/com.sun.javafx.event.EventUtil.fireEvent(Unknown Source) at javafx.base/javafx.event.Event.fireEvent(Unknown Source) at javafx.graphics/javafx.scene.Scene$MouseHandler.process(Unknown Source) at javafx.graphics/javafx.scene.Scene.processMouseEvent(Unknown Source) at javafx.graphics/javafx.scene.Scene$ScenePeerListener.mouseEvent(Unknown Source) at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(Unknown Source) at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(Unknown Source) at java.base/java.security.AccessController.doPrivileged(Unknown Source) at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler.lambda$handleMouseEvent$2(Unknown Source) at javafx.graphics/com.sun.javafx.tk.quantum.QuantumToolkit.runWithoutRenderLock(Unknown Source) at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler.handleMouseEvent(Unknown Source) at javafx.graphics/com.sun.glass.ui.View.handleMouseEvent(Unknown Source) at javafx.graphics/com.sun.glass.ui.View.notifyMouse(Unknown Source) at javafx.graphics/com.sun.glass.ui.win.WinApplication._runLoop(Native Method) at javafx.graphics/com.sun.glass.ui.win.WinApplication.lambda$runLoop$3(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source) Caused by: java.lang.reflect.InvocationTargetException at java.base/jdk.internal.reflect.DirectMethodHandleAccessor.invoke(Unknown Source) at java.base/java.lang.reflect.Method.invoke(Unknown Source) at com.sun.javafx.reflect.Trampoline.invoke(Unknown Source) at java.base/jdk.internal.reflect.DirectMethodHandleAccessor.invoke(Unknown Source) at java.base/java.lang.reflect.Method.invoke(Unknown Source) at javafx.base/com.sun.javafx.reflect.MethodUtil.invoke(Unknown Source) at javafx.fxml/com.sun.javafx.fxml.MethodHelper.invoke(Unknown Source) ... 43 more Caused by: java.lang.NullPointerException: Cannot invoke "org.cirdles.tripoli.sessions.Session.getMapOfAnalyses()" because "org.cirdles.tripoli.gui.TripoliGUIController.tripoliSession" is null at org.cirdles.tripoli.gui.TripoliGUIController.newAnalysisMenuItemOnAction(TripoliGUIController.java:502) ... 50 more

bowring commented 2 months ago

you need to start a new session first unless you drag n drop which will create a new session. I will fix menu bar to de-activate analysis when no session.

bowring commented 1 month ago

Fixed in v0.5.2

noahmclean commented 1 month ago

Groovy.