Error with Kronos.scRT::binning

CL-CHEN-Lab / Kronos_scRT

A uniform framework for single-cell replication timing analysis

GNU General Public License v3.0

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Error with Kronos.scRT::binning #14

Open yangjim221 opened 8 months ago

yangjim221 commented 8 months ago

when I run the following code in R bins_ms = Kronos.scRT::binning( RefGenome = './mm10.fa', bowtie2_index = './mm10', directory_to_bamfiles = './test', cores = 2,read_size=150,paired_ends=T )

I get the following error: task 1 failed - "string must be a vector, not a object."

can you help me ?

josephides commented 3 months ago

Hi @yangjim221 can you try to run the tutorial dataset so we can see where the error is coming from? Which R version are you using?