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CLOSER-Cohorts / CMIE

CLOSER's Metadata Integration Environment uses Colectica's SDK to update and maintain Colectica Repository to CLOSER's standards.
MIT License
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Function/tool to output content and links for all datasets/instruments/mappings in Discovery #12

Open HayleyMills opened 6 years ago

HayleyMills commented 6 years ago

This is needed to test that cmie has loaded items correctly, but also to check what is currently in Discovery. There are datasets which currently do not have mappings and in some cases datasets linked to the wrong questionnaires, we need to be able to identify these to correct them.

HayleyMills commented 6 years ago

List of known issues currently in Discovery.

alspac_91_hab (no mappings) ncds_91_myc (incorrect dataset in Discovery) ncds_biomed (dataset and questionnaire not mapped) alspac_07_gac8_f (incorrect variable to question mappings) alspac_07_gac8_m (incorrect variable to question mappings) alspac_98_mah (missing some mappings) alspac_05_tlas (no mappings) closer_wp1_nshd (no topic mappings closer_wp1_bcs70_mcs_ncds (no topic mappings) closer_wp1_alspac (no topic mappings) alspac_12weeks (no mappings) alspac_91_yp (no topic mappings on questions)

There appears to be many questionnaires without topics mapped to the questions. We will need a systemic way of finding these.