Documentation request: Comparisons to cobrapy, COBRA.jl, RAVEN etc

COBREXA / COBREXA.jl

COnstraint Based Reconstruction and EXascale Analysis (in Julia)

https://cobrexa.github.io/COBREXA.jl/stable/

Apache License 2.0

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Documentation request: Comparisons to cobrapy, COBRA.jl, RAVEN etc #58

Closed oxinabox closed 2 months ago

oxinabox commented 2 months ago

Target functionality

It would be good to include a section in the documentation on noteworthy differences, and pros and cons vs other FBA software. Such as cobrapy, RAVEN and COBRA.jl

I am currently looking into what software to use for our project and I don't really know. (Other engineer i am working with is pushing for cobrapy)

Desired output

A page in the documentation with a list of dot-points and or a table summarizing.

exaexa commented 2 months ago

We wanted to do this but all comparisons are super subjective. Stuff like "feature matrix" is certainly a problematic discussion topic :D :D So we're just going to point to the relevant section in the paper when it's out.

I guess I can add 2 bullet points with the actually new things here to the readme, will do asap.

I'll leave this open here so that I don't forget to add citation.