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CODAIT / covid-notebooks

Jupyter notebooks that analyze COVID-19 time series data
Apache License 2.0
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Text Extensions for Pandas #16

Closed mboldin closed 3 years ago

mboldin commented 4 years ago

The util.py file that is used in come notebooks imports Text Extensions for Pandas (import text_extensions_for_pandas as tp). It found it at https://github.com/CODAIT/text-extensions-for-pandas. Can you add this as part of the directions/requirements ?

frreiss commented 4 years ago

The text-extensions-for-pandas package is not yet on PyPI. Once it is on there we will add that file to our reuirements.txt. In the meantime, we recommend using the script env.sh to set up a Python environment for running these notebooks locally as described in the installation instructions for this project.

Alternately, you can install the library directly from Github by running

pip install git+https://github.com/CODAIT/text-extensions-for-pandas
frreiss commented 4 years ago

Leaving this issue open until text-extensions-for-pandas is in PyPI and in this project's requirements.txt file.

mboldin commented 4 years ago

Got it working

FYI for others, the Github version of text-extensions-for-pandas did not work with Python 3.8. The documentation for the larger project explains the CODAIT setup was designed for Python 3.7

I also needed to downgrade Pandas to import text-extensions-for-pandas pip install pandas==1.0.5

frreiss commented 4 years ago

Thanks for the help, @mboldin !

The incompatibility between Text Extensions for Pandas and Pandas 1.1 should be fixed now as of pull request 77. You'll need to install an updated version of the library to get the changes. Please let us know if you encounter any additional problems.