CODARcode / Example-Heat_Transfer

3 stars 3 forks source link

App hangs with dataspaces #7

Closed kshitij-v-mehta closed 7 years ago

kshitij-v-mehta commented 7 years ago

Trying dataspaces after the recent merge #6 , but seems to hang.

$> ./run-workflow.sh 20 DATASPACES
swift: launching dataspaces_server
Checking for conf:
Conf exists.
swift: launching: ./heat_transfer_adios2
size: 6
swift: launching: stage_write/stage_write
Input stream            = heat.bp
Output stream           = staged.bp
Read method             = DATASPACES (id=3)
Read method parameters  = "max_chunk_size=100; app_id =32767; 
verbose= 3;poll_interval  =  100;"
Write method            = MPI
Write method parameters = ""
Variable to transform   = ""
Transform parameters    = ""
 Process number        : 4 x 3
 Array size per process at first step: 40 x 50
Step    1:
Writing:  filename               size(GB)    io_time(sec)      GB/s

No progress beyond this point.

cc: @philip-davis

philip-davis commented 7 years ago

I don't see heat_transfer connecting to DataSpaces in that output. Is the method attribute set to DATASPACES for the "heat" group? (i.e. is the line uncommented in heat_transfer.xml?)

Thanks, Philip

On Tue, Jul 18, 2017 at 11:31 AM, Kshitij Mehta notifications@github.com wrote:

Trying dataspaces after the recent merge #6 https://github.com/CODARcode/Example-Heat_Transfer/pull/6 , but seems to hang.

$> ./run-workflow.sh 20 DATASPACES swift: launching dataspaces_server Checking for conf: Conf exists. swift: launching: ./heat_transfer_adios2 size: 6 swift: launching: stage_write/stage_write Input stream = heat.bp Output stream = staged.bp Read method = DATASPACES (id=3) Read method parameters = "max_chunk_size=100; app_id =32767; verbose= 3;poll_interval = 100;" Write method = MPI Write method parameters = "" Variable to transform = "" Transform parameters = "" Process number : 4 x 3 Array size per process at first step: 40 x 50 Step 1: Writing: filename size(GB) io_time(sec) GB/s

cc: @philip-davis https://github.com/philip-davis

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/CODARcode/Example-Heat_Transfer/issues/7, or mute the thread https://github.com/notifications/unsubscribe-auth/AGMio0_N5QoxVt8ooEDUUdK7iTBPs-r9ks5sPM_rgaJpZM4Obho8 .

kshitij-v-mehta commented 7 years ago

Yep, I did not modify the xml file! Thanks.

jychoi-hpc commented 7 years ago

Did you change xml file to use DATASPACES? I had a similar issue like this.

On Jul 18, 2017, at 11:31 AM, Kshitij Mehta notifications@github.com wrote:

Trying dataspaces after the recent merge #6 , but seems to hang.

$> ./run-workflow.sh 20 DATASPACES swift: launching dataspaces_server Checking for conf: Conf exists. swift: launching: ./heat_transfer_adios2 size: 6 swift: launching: stage_write/stage_write Input stream = heat.bp Output stream = staged.bp Read method = DATASPACES (id=3) Read method parameters = "max_chunk_size=100; app_id =32767; verbose= 3;poll_interval = 100;" Write method = MPI Write method parameters = "" Variable to transform = "" Transform parameters = "" Process number : 4 x 3 Array size per process at first step: 40 x 50 Step 1: Writing: filename size(GB) io_time(sec) GB/s

cc: @philip-davis

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.