[manualpipe] Asklepian 20211220

[SamStudio8]

Brief description

The Azure credentials have been rotated which will hopefully not be a problem tomorrow but this issue will track any trouble that chooses to arise.

Pipeline exit code: [Exit code]

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Executed by: [Name or initials] [Site code]

• [x] I am sure this pipeline is not already running (Only relevant for non-flocked pipelines)

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• [x] Engage pipeline via mqtt from a clean dedicated mqtt environment
• [ ] Disable NXF cache destruction (only applicable for ENA BAM pipe)
• [ ] Check output if necessary
• [ ] Check mqtt message is sent confirming completion, or send one if required (check in #tael-steam)
• [ ] Re-enable NXF cache destruction (if disabled)

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• [ ] Set appropriate issue flags and assignee

• [x] Manual intervention complete

• "Normal" service disrupted? YES/NO

• If yes, describe impact:

[BioWilko]

It has caused Asklepian to fall over

[SamStudio8]

Thanks @BioWilko, I've got it Update: fixed by https://github.com/SamStudio8/asklepian/commit/d9863927769f98f8aa645a44c3a05ca850e94899

[SamStudio8]

Should be good to re-raise now