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COMBAT-TB / irida-pipeline-plugins

Galaxy pipelines as plugin for IRIDA intergration
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Clean up irida-pipeline-plugins repository #13

Closed pvanheus closed 3 years ago

pvanheus commented 3 years ago
  1. Move all pipelines that are not under active development to an archived folder
  2. Fix or abandon CI integration
  3. Update README to describe repository contents

@zipho can you help me identify which pipelines should be archived?

zipho commented 3 years ago

Perhaps we can archive for the following directories:

raw sanbi-bvc-pipeline-plugin sars-cov-2-pipeline sars-cov tb-vcf-report-pipeline-plugin

If agree @pvanheus, will move them.

Not sure where the CI integration was going, will investigate and possibly abandon it.

pvanheus commented 3 years ago

@zipho yes, agree, archive those.

zipho commented 3 years ago

The README update is missing.

What should the contents thereof cover @pvanheus ?