The current pipeline output shows outputs from zipped HTML that are unreadable and JSON that has little visual value.
The IRIDA code hides zip, html and pdf output previews but the output name of the HTML outputs are mtbva_tb_variant_report_html and mtbva_tb_variant_dr_report_html. These names should be changed in the output workflow to ensure that they are not displayed.
The JSON output is named tb_profiler_json and should also be renamed to .json for easier filtering on the IRIDA end.
The current pipeline output shows outputs from zipped HTML that are unreadable and JSON that has little visual value.
The IRIDA code hides zip, html and pdf output previews but the output name of the HTML outputs are mtbva_tb_variant_report_html and mtbva_tb_variant_dr_report_html. These names should be changed in the output workflow to ensure that they are not displayed.
The JSON output is named tb_profiler_json and should also be renamed to .json for easier filtering on the IRIDA end.