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COMBINE-lab / salmon

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
https://combine-lab.github.io/salmon
GNU General Public License v3.0
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Adding <cstdint> includes to allow building with gcc13 #856

Closed A-N-Other closed 1 year ago

A-N-Other commented 1 year ago

As per https://gcc.gnu.org/gcc-13/porting_to.html, gcc13 changes the way it handles includes. These three files needed patching to allow the build to work.

rob-p commented 1 year ago

Thanks @A-N-Other! I changed the base branch to develop, as we generally pull everything through that branch before it makes it to master. Otherwise, these changes look good. Hopefully we'll get around to pushing out a patch release with this change soon.

A-N-Other commented 1 year ago

Happy to help! Have just been patching for the salmon package inspack, so figured I'd do a PR here as well.