Open wilcar opened 4 years ago
Do you have bioc_packages and github_packages set to NULL
in miniUI form?
Here are my settings :
Put NULL in both the boxes on the bottom right. "GitHub packages" and "Bioconductor packages" And try again. Let me know if/what new errors produce
Thanks Listening on http://127.0.0.1:4620 Running Photon The directory is C:/standaloneapp Warning in system2("git", args = c("clone https://github.com/ColumbusCollaboratory/electron-quick-start", : running command '"git" clone https://github.com/ColumbusCollaboratory/electron-quick-start C:/standaloneapp' had status 128 Le chemin d'accŠs sp‚cifi‚ est introuvable. Warning in shell(sprintf("%s/R.exe --file=%s/install_packages.R -q --slave --args cran_packages %s github_packages %s bioc_packages %s", : 'C:/standaloneapp/electron-quick-start/R-Portable-Win/bin/R.exe --file=C:/standaloneapp/electron-quick-start/R-Portable-Win/bin/install_packages.R -q --slave --args cran_packages mgcv,matrixStats,,tidyverse,DT,shinythemes,bsplus,shinyBS,leaflet,shinyjs,geosphere,googlesheets,waiter,shinyWidgets github_packages NULL bioc_packages NULL' execution failed with error code 1 Nom de r‚pertoire non valide. Warning in shell(sprintf("cd %s && npm install", electron_win_dir)) : 'cd C:\standaloneapp\electron-quick-start && npm install' execution failed with error code 1 Nom de r‚pertoire non valide. Warning in shell(sprintf("cd %s && npm run package-win", electron_win_dir)) : 'cd C:\standaloneapp\electron-quick-start && npm run package-win' execution failed with error code 1
I notice matrixStats,,tidyverse
... I dont think you want those two commas. Also try installing the tidyverse packages separately. Like dplyr,tidyr,stringr,purrr
etc
Ok, What is sp and cifi ? path are not found...
The directory is C:/standaloneapp/666736b9a1fd4433bba00cbb0524d8c6 Warning in system2("git", args = c("clone https://github.com/ColumbusCollaboratory/electron-quick-start", : running command '"git" clone https://github.com/ColumbusCollaboratory/electron-quick-start C:/standaloneapp/666736b9a1fd4433bba00cbb0524d8c6' had status 128 Le chemin d'accŠs sp‚cifi‚ est introuvable. Warning in shell(sprintf("%s/R.exe --file=%s/install_packages.R -q --slave --args cran_packages %s github_packages %s bioc_packages %s", : 'C:/standaloneapp/666736b9a1fd4433bba00cbb0524d8c6/electron-quick-start/R-Portable-Win/bin/R.exe --file=C:/standaloneapp/666736b9a1fd4433bba00cbb0524d8c6/electron-quick-start/R-Portable-Win/bin/install_packages.R -q --slave --args cran_packages mgcv,matrixStats,dplyr,readr,tidyr,DT,shinythemes,bsplus,shinyBS,leaflet,shinyjs,geosphere,googlesheets,waiter,shinyWidgets github_packages NULL bioc_packages NULL' execution failed with error code 1 Le chemin d'accŠs sp‚cifi‚ est introuvable. Warning in shell(sprintf("cd %s && npm install", electron_win_dir)) : 'cd C:\standaloneapp\666736b9a1fd4433bba00cbb0524d8c6\electron-quick-start && npm install' execution failed with error code 1 Le chemin d'accŠs sp‚cifi‚ est introuvable. Warning in shell(sprintf("cd %s && npm run package-win", electron_win_dir)) : 'cd C:\standaloneapp\666736b9a1fd4433bba00cbb0524d8c6\electron-quick-start && npm run package-win' execution failed with error code 1
Can you bring me more help ? (I installed node.js but non npm )
You need npm too.
Ok.
Hi, I'm definitely lost despite your help. I think I have performed all the operations correctly. Should I download R mobile phone? Does the "cloud" icon correspond to a link? In my mini Ui, it doesn't work. Can you complete the read.me for more details ?
Email me at arizvi@cbuscollaboratory.com and we can set up a screenshare.
Did wilcar's issue get resolved? I'm experiencing the same issue.
Also Katie mentioned videos on how to swap out the app.R in her R consortium talk https://youtu.be/ARrbbviGvjc
Do you know were I can find those videos?
@tsolloway Can you make your own ticket and describe your issue. Shoot me a sessionInfo()
as well. Thanks.
sure. Already solved it by cloning the repo in there via terminal, and the script appears to skips that step. Getting a new error in the build, which we're working on. I'll try to get to a reprex before noting the issue.
Did this get resolved? I'm getting the same error.
Is it because I have ui.R and server.R separately?
sure. Already solved it by cloning the repo in there via terminal, and the script appears to skips that step. Getting a new error in the build, which we're working on. I'll try to get to a reprex before noting the issue.
I'm also seeing a similar issue. Photon tries to create a electron-quick-start file instead of a electron-quick-start folder. I'm going to try manually cloning the repo.
photon:::photon_rstudioaddin()
Listening on http://127.0.0.1:3147 Warning: package ‘stringr’ was built under R version 3.5.2 Running Photon The directory is C:/Users/Arthur/Dropbox/Financial/preferred Warning in system2("git", args = c("clone https://github.com/ColumbusCollaboratory/electron-quick-start", : running command '"git" clone https://github.com/ColumbusCollaboratory/electron-quick-start C:/Users/Arthur/Dropbox/' had status 128 The system cannot find the path specified.
I've getting the same error as ahcyip. Any updates?
I have multiple issues on Widows 10 plateform an R 3.6 Can you help me ?
Listening on http://127.0.0.1:5998 Running Photon The directory is C:/standaloneapp Warning in system2("git", args = c("clone https://github.com/ColumbusCollaboratory/electron-quick-start", : running command '"git" clone https://github.com/ColumbusCollaboratory/electron-quick-start C:/standaloneapp' had status 128 Le chemin d'accŠs sp‚cifi‚ est introuvable. Warning in shell(sprintf("%s/R.exe --file=%s/install_packages.R -q --slave --args cran_packages %s github_packages %s bioc_packages %s", : 'C:/standaloneapp/electron-quick-start/R-Portable-Win/bin/R.exe --file=C:/standaloneapp/electron-quick-start/R-Portable-Win/bin/install_packages.R -q --slave --args cran_packages mgcv,matrixStats,tidyverse,DT,shinythemes,bsplus,shinyBS,leaflet, shinyjs,geosphere,googlesheets,waiter,shinyWidgets github_packages bioc_packages ' execution failed with error code 1 Nom de r‚pertoire non valide. Warning in shell(sprintf("cd %s && npm install", electron_win_dir)) : 'cd C:\standaloneapp\electron-quick-start && npm install' execution failed with error code 1 Nom de r‚pertoire non valide. Warning in shell(sprintf("cd %s && npm run package-win", electron_win_dir)) : 'cd C:\standaloneapp\electron-quick-start && npm run package-win' execution failed with error code 1