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CRI-iAtlas / iatlas-app

R Shiny app for CRI iAtlas, an interactive web portal for exploring immuno-oncology data. (iAtlas portal 2022 and beyond)
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ICI Datasets overview lists fewer datasets ICI than cohort selection #224

Closed vthorsson closed 1 year ago

vthorsson commented 2 years ago

The live app lists 12 datasets on Datasets Overview

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ICI cohort selection has three more

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The three seem to be Chen 2016 , Melero 2019, Prat 2017

vthorsson commented 2 years ago

15 is also supported by this query 

ici_datasets <- iatlas.api.client::query_datasets(types = "ici")

as seen in ICI notebooks such as https://github.com/CRI-iAtlas/iatlas-notebooks/blob/main/ici_models_elastic_net.ipynb

heimannch commented 1 year ago

This is already taken care of in af1ea95106083a1ba2f51fdafbbf4aac2bab0c5d. The missing ones in the table are Nanostring datasets, table will be updated when the ui accommodating the nanostring datasets is merged.