CRI-iAtlas iatlas-data issues

CRI-iAtlas / iatlas-data

MOVED TO GITLAB -> https://gitlab.com/cri-iatlas/iatlas-data.git

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issues

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patch/improvement: [#173500665] Don't need that huge file.

#115 jonryser closed 4 years ago
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patch/doc: [#173500665] Create Synapse config when building DB.

#114 jonryser closed 4 years ago
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Staging redo test db

#113 andrewelamb closed 4 years ago
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patch/doc: Updated READMEs with dataset_id where needed. Fixed some f…

#112 jonryser closed 4 years ago
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add tags to publications

#111 andrewelamb opened 4 years ago
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add io_module columns to datasets

#110 andrewelamb opened 4 years ago
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add genesets to publications

#109 andrewelamb opened 4 years ago
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redo how age works

#108 andrewelamb opened 4 years ago
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redo how node and edge feather files are rpocessed

#107 andrewelamb closed 4 years ago
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Add TCGA subtype publications to table

#106 andrewelamb opened 4 years ago
1
Staging add publication table

#105 andrewelamb closed 4 years ago
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Staging add dataset table

#104 andrewelamb closed 4 years ago
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changed some joins to inner from left to handle removed genes

#103 andrewelamb closed 4 years ago
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Merging staging into the data_migration branch.

#102 jonryser closed 4 years ago
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Data migration synapse

#101 jonryser closed 4 years ago
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Staging from synapse

#100 andrewelamb closed 4 years ago
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Created setup for rstudio container, connection to the database

#99 rmrt90 closed 4 years ago
1
Bugfix/issue #88

#98 jonryser closed 4 years ago
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Merge staging to the data_migrations branch.

#97 jonryser closed 4 years ago
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Bugfix/issue #85

#96 jonryser closed 4 years ago
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Built tags_to_tags with file extension.

#95 jonryser closed 4 years ago
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remove/update nodes_to_tags table

#94 andrewelamb closed 4 years ago
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Errors in first time building the db

#93 heimannch closed 4 years ago
1
Nodes for ECN network have no label values

#92 andrewelamb closed 4 years ago
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Add gene alias table

#91 andrewelamb opened 4 years ago
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Add additional gene types

#90 andrewelamb closed 4 years ago
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Driver results, and copy number results tables need dataset

#89 andrewelamb closed 4 years ago
1
Genes in copy number results table missing from genes table

#88 andrewelamb closed 4 years ago
2
edges_to_tags missing

#87 andrewelamb closed 4 years ago
2
remove null values from samples_to_mutations

#86 andrewelamb closed 4 years ago
0
Missing tags to tags relationships

#85 andrewelamb closed 4 years ago
2
PCAWG study missing form test database

#84 andrewelamb closed 4 years ago
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Tag display names

#83 andrewelamb closed 4 years ago
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staging to data_migration

#82 jonryser closed 4 years ago
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Test data file to help tests pass.

#81 jonryser closed 4 years ago
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Staging to data_migration

#80 jonryser closed 4 years ago
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Feature/nodes edges

#79 jonryser closed 4 years ago
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Staging to data_migration with successful PCAWG data build.

#78 jonryser closed 4 years ago
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Feature/nodes edges

#77 jonryser closed 4 years ago
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Redo gene ids

#76 andrewelamb closed 4 years ago
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Feature/new module data ff creators

#75 jonryser closed 4 years ago
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Feature/new module data ff creators

#74 jonryser closed 4 years ago
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Feature/new module data ff creators

#73 jonryser closed 4 years ago
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Feature/new module data ff creators

#72 jonryser closed 4 years ago
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Direction is also required.

#71 jonryser closed 4 years ago
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Fixing HORRIBLE copy and paste.

#70 jonryser closed 4 years ago
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Feature/copy number results

#69 jonryser closed 4 years ago
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Build copy_number_results table script. Additional commits that were …

#68 jonryser closed 4 years ago
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Feature/copy number results

#67 jonryser closed 4 years ago
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Feature/data migration pcawg patients

#66 jonryser closed 4 years ago
0