search

CRI-iAtlas / shiny-iatlas

An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
https://www.cri-iatlas.org
Apache License 2.0
47 stars 12 forks source link

Provide Information on TCGA Subtypes #125

Closed vthorsson closed 5 years ago

vthorsson commented 5 years ago

Populate the information fields in the TCGA subtypes by carrying information from the original TCGABiolinks sources and preferably the originating manuscript (TCGA marker paper)

See http://bioinformaticsfmrp.github.io/TCGAbiolinks/subtypes.html

and TCGA Molecular Subtypes Methods section of PanImmune paper

vthorsson commented 5 years ago

Source information in https://docs.google.com/spreadsheets/d/11VdviGiovgnSzTRb-0-Qv5SUfkXdoqSlAs4D9mFp1ao/edit#gid=0

vthorsson commented 5 years ago

We have now included the source publications as annotations on the subtypes.