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CRI-iAtlas / shiny-iatlas

An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
https://www.cri-iatlas.org
Apache License 2.0
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More comprehensible terms for CIBERSORT aggregates #88

Closed vthorsson closed 6 years ago

vthorsson commented 6 years ago

Would be best to find better labels for our four ways of displaying and working with CIBERSORT fractions.

The values are estimated by CIBERSORT (“Original” fraction), and various combinations of those estimates are provided, for example “Aggregate 1” corresponding to broader categories of cells, and “Aggregate 2” and “Aggregate 3” to finer categories.

jaeddy commented 6 years ago

@vthorsson did you want to revisit this?

vthorsson commented 6 years ago

Per email discussion with group Aggregate 1 becomes: Multipotent Progenitor Cell Derivative Class Aggregate 2 becomes: Common Lymphoid and Myeloid Cell Derivative Class Aggregate 3 becomes: Differentiated Lymphoid and Myeloid Cell Derivative Class