CRISPRJWCHOI / CRISPR_toolkit

CRISPR Indel, base edit analysis
MIT License
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Running on test data, program works, but there is no output. #2

Open Fatberg opened 1 year ago

Fatberg commented 1 year ago

Out log is as follows:

Program start {'multicore': 15, 'chunk_number': 400000, 'base_quality': '20', 'gap_open': -10.0, 'gap_extend': 1.0, 'insertion_window': 4, 'deletion_window': 4, 'pam_type': 'Cas9', 'pam_pos': 'Forward', 'python': '--user', 'user_name': None, 'project_name': 'SAMSUNG', 'pickle': 'False', 'split': 'False', 'class_fastq': 'True', 'ednafull': None} File num check: input folder and project list The file list is correct, pass

Check that all folders are well created. All output folders have been created.

Program end

Yet no output files are created, I have attempted this in both Py2 and 3 envs useing your other uploads, same result.