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CSB5 / OPERA-MS

OPERA-MS - Hybrid Metagenomic Assembler
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How to download or make database? #49

Open YongxinLiu opened 4 years ago

YongxinLiu commented 4 years ago

I use perl OPERA-MS.pl install-db. However, we can not downloaded the database in dropbox.

Can you don't use dropbox? In China mainland, we can not access dropbox or google.

Or, please give the detail tutorial for preparing the database.

TongChengxuan commented 3 years ago

Dear Yongxin,

you can use the following figshare link to download the database. 

"genome_1.tar.gz", "https://ndownloader.figshare.com/files/22364238",
"genome_2.tar.gz", "https://ndownloader.figshare.com/files/22378161",
"genome_3.tar.gz", "https://ndownloader.figshare.com/files/22385391",
"genome_4.tar.gz", "https://ndownloader.figshare.com/files/22392252",
"genome_5.tar.gz", "https://ndownloader.figshare.com/files/22405236",
"genome_6.tar.gz", "https://ndownloader.figshare.com/files/22409529",
"genome_7.tar.gz", "https://ndownloader.figshare.com/files/22420533",
"genomes.msh.tar.gz", "https://ndownloader.figshare.com/files/22423779",
"genomes_lists.txt.tar.gz", "https://ndownloader.figshare.com/files/22423785",
"genomes_length.txt.tar.gz", "https://ndownloader.figshare.com/files/22423782"

Best regards, Chengxuan