CVNRneuroimaging / infrastructure

Issue tracking, system documentation and configs for operations side of the neuroimaging core @ Atlanta VA CVNR / Emory University
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FIX failure on Lens #175

Open J-Drucker opened 8 years ago

J-Drucker commented 8 years ago

The classifier training portion of FIX is failing on Lens (but works fine on qball2). This classification process uses R behind the scenes. Here's the output from R... any idea what's going on? (Side note: FIX was failing, but not crashing; it would fail to produce output, and give absolutely no error message. The output below is from a hidden file I wouldn't have even known existed if I didn't dig through the FAQ. Bottom line, FSL does a lousy job of documentation).

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair" Copyright (C) 2016 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details.

Natural language support but running in an English locale

R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R.

library(party) Loading required package: grid Loading required package: mvtnorm Loading required package: modeltools Loading required package: stats4 Loading required package: strucchange Loading required package: zoo

Attaching package: ‘zoo’

The following objects are masked from ‘package:base’:

as.Date, as.Date.numeric

Loading required package: sandwich Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/local/lib/R/site-library/party/libs/party.so': /usr/local/lib/R/site-library/party/libs/party.so: undefined symbol: rmultinom Error: package or namespace load failed for ‘party’ Execution halted

kmcgregor123456 commented 6 years ago

closed