Amino acid numbering - Githubissues

CWRU-CPB / ProtMapMS

ProtMapMS is a search engine for protein footprinting experiments.

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Amino acid numbering #1

Open rohitmpibpc opened 5 years ago

rohitmpibpc commented 5 years ago

Hi,

There seems to be an issue with numbering of amino acids in MS2 scans on GUI. For e.g – Take peptide 198-203. The sequence is EVMIMK and mentioned correctly in table. It is wrong if you look at individual MS2 scan. V which is 199 is wrongly numbered as 198. Similarly, M which is 200 is wrongly mentioned as 199.

Any thoughts, Thanks Rohit

many-states commented 5 years ago

Thank you for pointing this out. The numbering is done by the GUI code, which is in another repository. I will leave this issue open referencing the problem there.