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CWWhitney / Decision_Analysis_Course

🎓 Uni-Bonn Decision Analysis graduate course, lectures and materials
https://agtools.app/decision_analysis/
MIT License
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Unstable - Rstudio Connect and the Linux server - parse error: trailing garbage #25

Closed CWWhitney closed 10 months ago

CWWhitney commented 10 months ago

This and other websites hosted on Rstudio Connect and the Linux server seem to be down:

image_720

The error is about 'parse error: trailing garbage'

1/27 10:29:17.210 (GMT) Running on host: inresgb-0002 11/27 10:29:17.232 (GMT) Linux distribution: Ubuntu 20.04.6 LTS (focal) 11/27 10:29:17.236 (GMT) Using Packrat dir /opt/rstudio-connect/mnt/app/packrat/lib/x86_64-pc-linux-gnu/4.1.2 11/27 10:29:17.244 (GMT) Server version: 2021.12.1 11/27 10:29:17.244 (GMT) LANG: en_US.UTF-8 11/27 10:29:17.244 (GMT) R version: 4.1.2 11/27 10:29:17.244 (GMT) shiny version: 1.7.1 11/27 10:29:17.244 (GMT) httpuv version: 1.6.3 11/27 10:29:17.244 (GMT) rmarkdown version: 2.11 11/27 10:29:17.244 (GMT) knitr version: 1.37 11/27 10:29:17.244 (GMT) jsonlite version: 1.7.2 11/27 10:29:17.244 (GMT) RJSONIO version: (none) 11/27 10:29:17.244 (GMT) htmltools version: 0.5.2 11/27 10:29:17.244 (GMT) Using pandoc: /opt/rstudio-connect/ext/pandoc/2.16 11/27 10:29:17.454 (GMT) Using jsonlite for JSON processing 11/27 10:29:17.459 (GMT) Using Shiny bookmarking base directory /opt/rstudio-connect/mnt/bookmarks 11/27 10:29:17.459 (GMT) 11/27 10:29:17.459 (GMT) Starting R with process ID: '1218904' 11/27 10:29:17.508 (GMT) Shiny R Markdown document starting ... 11/27 10:29:18.404 (GMT) Error in value[3L] : parse error: trailing garbage 11/27 10:29:18.404 (GMT) ":{},"value":["0.10.1"]}]}]} {"type":"list","attributes":{}, 11/27 10:29:18.404 (GMT) (right here) ------^ 11/27 10:29:18.404 (GMT) Calls: local ... tryCatch -> tryCatchList -> tryCatchOne -> 11/27 10:29:18.404 (GMT) Execution halted 11/27 10:29:18.404 (GMT) Shiny R Markdown document exiting ...

CWWhitney commented 10 months ago

Solved by rebuilding the pages / app locally in RStudio and adding to the git repo (commit push) - a few times -> updated all packages (i.e. installed anew) and now all websites are back online with a warning: 11/27 10:50:52.902 (GMT) Warning message: 11/27 10:50:52.903 (GMT) In packrat::restore(overwrite.dirty = TRUE, prompt = FALSE, restart = FALSE) : 11/27 10:50:52.903 (GMT) The most recent snapshot was generated using R version 4.1.3 Completed packrat build against R version: '4.1.2'