Open self-supervisor opened 3 years ago
All cells by mouse identity:
Gaussian smoothing (std=1) PROBABLY WRONG
Unsmoothed: PROBABLY WRONG
From original ratemap field:
EDIT: First two ratemaps are wrong. The problem was in taking only the positions where a spike occurred as input to calculate the occupancy. There are two positions (positions_x & trajectory_x). The latter includes all positions. Gaussian smoothing (std=2): Gaussian smoothing (std=1): Unsmoothed: Normalized ratemaps: Normalized non smoothed:
confirmed rate maps looked the same
now I am going to group by tetrode now
Best grid cell for each animal:
Based on grid score in https://github.com/rhayman/ephysiopy
Same based on original firing maps:
I am on this atm