CambridgeMolecularEngineering / chemdataextractor2

ChemDataExtractor Version 2.0
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PIP installation is broken #30

Closed rccc closed 1 year ago

rccc commented 1 year ago

Hello

I am trying to install chemdataextactor from a miniconda container:

python3-dev, gcc, g++ are installed

I got this error when installation script try to build dependencies for spacy:

     Installing collected packages: wasabi, plac, cymem, wheel, tqdm, srsly, setuptools, preshed, numpy, murmurhash, Cython, blis, thinc
        Running setup.py install for preshed: started
        Running setup.py install for preshed: finished with status 'error'

Installation with conda is not possible, no channel for chemdataextractor2

May i ask if you can provide a docker image with an cde2 already installed, these kind of libraries have so much dependencies that can broken, it will be more reliable to have a docker image to use directly.