CambridgeMolecularEngineering / chemdataextractor2

ChemDataExtractor Version 2.0
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requests.exceptions.HTTPError: 403 Client Error: The specified account is disabled. #47

Closed 51Yy closed 7 months ago

51Yy commented 8 months ago

Hello,

Thanks for sharing your great work in data mining!

Here is my issue: I have installed chemdataextractor2 by using 'pip install chemdataextractor2'. During the installation, it worked well, but when I tried to import the chemdataextractor2, it raised an error like this:

error

It seemed like it failed to access the 'scibert_cased_vocab_1.0.txt' because of the account permissions. I didn't know if it was my mistaken installation or something else

Could you tell me how to solve this? for example, providing a link to download these files (I noticed that four files are required) for use?

Thanks!

Dingyun-Huang commented 8 months ago

Hi there,

The online sharing repository has expired, and we are getting it renewed as soon as possible. If you are in a hurry, I can share the files through email and please place these in the output of cde data where command. Please provide an email address if you want them.

Something like this image

Do the import and it should work out.

Best wishes, Dingyun

51Yy commented 8 months ago

Hi Dingyun,

Thanks for your kind help!

I would like to get the data files via email, and here is my email: @.***

Best wishes, Yiyang Wu

At 2023-12-15 00:13:56, "DINGYUN HUANG" @.***> wrote:

Hi there,

The online sharing repository has expired, and we are getting it renewed as soon as possible. If you are in a hurry, I can share the files through email and please place these in the output of cde data where command.

Something like this image.png (view on web)

Do the import and it should work out.

Best wishes, Dingyun

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

Dingyun-Huang commented 8 months ago

Hi there,

I cannot see the email address. Do you mind commenting on GitHub web page instead of replying to the email notification please? Or you can drop me a message at dh582@cam.ac.uk.

Best wishes, Dingyun

51Yy commented 8 months ago

Hi dingyun,

I'm sorry for my carelessness. Here is my email address: yiyangwu2021@163.com.

Thanks for your kind help

Best wishes, yiyang

minhiiii commented 8 months ago

@Dingyun-Huang

Hi dingyun,

I am also experiencing the same issue as yiyang, and I would like to know if it's possible to send me the model files.

My email is fkfajsl@korea.ac.kr.

I appreciate your kind help.

Best Regards, Minhi Han

Lacyam commented 8 months ago

Hi dingyun,

I am also experiencing the same issue as yiyang, and I would like to know if it's possible to send me the model files. I hope it will be available soon. Thanks.

My email is xyyang0516@163.com

Thank you very much.

Best wishes, Xiaoyan Yang

AhmetTasdemir commented 7 months ago

I am encountering an issue during the Docker build process where the models required by ChemDataExtractor are not being downloaded successfully. pip install --no-cache-dir chemdataextractor2 worked fine but the build log indicates the following:

image

Environment:

ChemDataExtractor version: 2 Python version: 3.8 Docker version: 24.0.7 Steps to Reproduce:

Run the Docker build with the provided Dockerfile. Observe the failure in downloading the required models.

Expected Behavior: I expected the Docker build process to successfully download the required models for ChemDataExtractor.

Actual Behavior: The models are not being downloaded, and the build process is failing with the mentioned error.

My e-mail is ahmettsdmr1312@gmail.com

Thank you for your time

Best Regards, Ahmet Taşdemir.

OscartGiles commented 7 months ago

Do you have a timeframe for when the data hosting will be resolved?

hsurana299 commented 7 months ago

Hi dingyun,

I am also experiencing the same issue as yiyang, and I would like to know if it's possible to send me the model files. I hope it will be available soon. Thanks.

My email is [hsurana299@gmail.com]

Thank you very much.

Best wishes, Harsh Surana

Dingyun-Huang commented 7 months ago

Hi there, the issue has been addressed. Hopefully it can get updated to PyPi and Conda in a few days.

OscartGiles commented 7 months ago

Hi there, the issue has been addressed. Hopefully it can get updated to PyPi and Conda in a few days.

Excellent thanks. Is the data being hosted at the same address, or have you found another provider?

Dingyun-Huang commented 7 months ago

Hi there, the issue has been addressed. Hopefully it can get updated to PyPi and Conda in a few days.

Excellent thanks. Is the data being hosted at the same address, or have you found another provider?

It is in a new Azure account, the link in the package to these files have been edited to reference the new source. The installing procedure will stay the same.

Dingyun-Huang commented 7 months ago

This should now be fixed.