Open Dabbler23 opened 1 week ago
That's a strange one! Why don't you try re-installing the conda environment, since it seems to be a tensorflow issue. Try the steps below and report back:
ping
environment is deactivated by running conda deactivate
.conda remove -n ping --all
conda clean --all
PINGMapper
directory (step 7)Hey Cameron Thanks so much for the swift reply. I tried what you suggested and it worked a treat! Have just processed my first transect data, collected yesterday, and super happy. Image attached. I did get an error message (log recorded) showing the substrate pick had not worked. But I'll have a bit of a play first as I may have got some of the inputs wrong (this is literally my first attempt at processing). For your interest, we're looking at associating fish telemetry data with the sonagarms. I guess we'll see the tagged fish hanging around areas like timber and rock bars etc. Time will tell. Again, thank you very much for your help, and for making this program available. Best regards Sean
On Sun, Oct 20, 2024 at 12:09 AM Cameron Bodine @.***> wrote:
That's a strange one! Why don't you try re-installing the conda environment, since it seems to be a tensorflow issue. Try the steps below and report back:
- Make sure ping environment is deactivated by running conda deactivate.
- Remove the environment with conda remove -n ping --all
- Clean up unused packages with conda clean --all
- Then reinstall the environment starting at Step 8 https://cameronbodine.github.io/PINGMapper/docs/gettingstarted/Installation.html#step-8 Make sure the terminal is in the PINGMapper directory (step 7)
— Reply to this email directly, view it on GitHub https://github.com/CameronBodine/PINGMapper/issues/124#issuecomment-2423841058, or unsubscribe https://github.com/notifications/unsubscribe-auth/BMHY2LZPPTIAU4S7XODAKZLZ4JKZTAVCNFSM6AAAAABQG7DBK6VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDIMRTHA2DCMBVHA . You are receiving this because you authored the thread.Message ID: @.***>
Describe the bug
Hi. Probably user error more than a bug. I was able to install version 1 fine and the small test data ran fine. However, I pushed my luck and tried to follow the Update Installation instructions and now cannot run the test data.
To Reproduce
Steps to reproduce the behavior: Please see screen grabs
Expected behavior
Small test data set to be processed
Screenshots
If applicable, add screenshots to help explain your problem.
Desktop (please complete the following information):
Dell Laptop, 64-bit, Windows 11 Home
Additional context
Unfortunately I'm a complete newbie with respect to Miniconda and command prompts. As I mentioned, my initial install seemed to work fine with the test data, so I'd be quite happy just to uninstall everything and start again if that is an easier option?? But I don't know how to uninstall! Thanks very much for your help, and great tool by the way, can't wait to run some of my own sss imagery through it. Cheers