CamilaDuitama / muset

MUSET. Set of utilities for the construction of abundance unitig matrices from sequencing data
MIT License
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Add filtering step to remove reference sequences added by user #6

Open CamilaDuitama opened 4 months ago

CamilaDuitama commented 4 months ago

(optional) Remove k-mers belonging to a given collection of reference sequences Run steps 1. and 2. with such a collection as input Run kmat_tools diff -k [kmer-size] -z [matrix_samples] [matrix_references] (Note: the -z parameter is mandatory if the input matrix has been generated with kmtricks!)