Closed fac2003 closed 11 years ago
A simple work-around consist in adding a group that contains at least one sample, for instance: --groups sample=some-sample, where some-sample must match the basename of one of the alignments provided on the command line.
This bug is fixed in GitHub stable branch. Will be part of the next stable release.
Fixed in 2.3.1.
The following NPE can be observed when running discovery-sequence-variants with no groups.
java.lang.NullPointerException at edu.cornell.med.icb.goby.modes.DiscoverSequenceVariantsMode.configure(DiscoverSequenceVariantsMode.java:192) at edu.cornell.med.icb.goby.modes.GenericToolsDriver.execute(GenericToolsDriver.java:218) at edu.cornell.med.icb.goby.modes.GobyDriver.main(GobyDriver.java:55)