CapraLab / pdbmap

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Refactor PDBMapTranscript into a heirarchy of transcript types #10

Closed ChrisMoth closed 2 years ago

ChrisMoth commented 5 years ago

For genomic mining of variant data, recast class PDBMapTranscript as PDBMapTranscriptEnsembl

Frequent transcript formats unclude Uniprot ID, UniparcID, Fasta.

Typically, transcript identifiers are supplied at construction. From there, different levels of database queries are used to return (and cache) aa_seq (amino acid letter sequences)