Gnomad Variants: Identify and reject transcripts which don't map to Chrom1-22/X/Y/MT

CapraLab / pdbmap

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Gnomad Variants: Identify and reject transcripts which don't map to Chrom1-22/X/Y/MT #32

Open ChrisMoth opened 2 years ago

ChrisMoth commented 2 years ago

When the transcript_to_genomic.pl PERL script receives chrCHR.... chromosome postions, instead of chr1-chr22,chrX/chrY/chrMT, then we need to exit away, without crashing, by "simply" returning "0 missense variants found"