CapraLab / pdbmap

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Convert PyVCF lib to Python3, and integrate into PDBMap. #33

Open ChrisMoth opened 2 years ago

ChrisMoth commented 2 years ago

Sadly, newer versions of Python, particularly 3.9.x as in November '21 Anaconda distro, can no longer instal PyVCF because the setuptools no longer perform Python2to3 conversion.

https://github.com/jamescasbon/PyVCF/issues/334 https://github.com/jamescasbon/PyVCF/issues/332

The above github repo is not accepting pull requests, and seems orphaned.

And before this, I was encountering increasing problems building docker containers, likely due to the same problem.