CarloGraziani / BayesVaccineEfficacy

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Evidence for increased breakthrough rates of SARS-CoV-2 variants of concern in BNT162b2 mRNA vaccinated individuals #2

Open matthewlloyd opened 3 years ago

matthewlloyd commented 3 years ago

I’d be very interested to see a Bayesian reanalysis of the latest data from Israel, perhaps even in combination with the Pfizer data from April 1st:

https://www.medrxiv.org/content/10.1101/2021.04.06.21254882v1

“The SARS-CoV-2 pandemic has been raging for over a year, creating global detrimental impact. The BNT162b2 mRNA vaccine has demonstrated high protection levels, yet apprehension exists that several variants of concerns (VOCs) can surmount the immune defenses generated by the vaccines. Neutralization assays have revealed some reduction in neutralization of VOCs B.1.1.7 and B.1.351, but the relevance of these assays in real life remains unclear. Here, we performed a case-control study that examined whether BNT162b2 vaccinees with documented SARS-CoV-2 infection were more likely to become infected with B.1.1.7 or B.1.351 compared with unvaccinated individuals. Vaccinees infected at least a week after the second dose were disproportionally infected with B.1.351 (odds ratio of 8:1). Those infected between two weeks after the first dose and one week after the second dose, were disproportionally infected by B.1.1.7 (odds ratio of 26:10), suggesting reduced vaccine effectiveness against both VOCs under different dosage/timing conditions. Nevertheless, the B.1.351 incidence in Israel to-date remains low and vaccine effectiveness remains high against B.1.1.7, among those fully vaccinated. These results overall suggest that vaccine breakthrough infection is more frequent with both VOCs, yet a combination of mass-vaccination with two doses coupled with non-pharmaceutical interventions control and contain their spread.”

CarloGraziani commented 3 years ago

Hi Matthew. I think we have to wait for more data. Quite aside from the very considerable data selection effects that went into that study, one has to reflect on the fact that a Poisson distribution with a mean of 4.5 has about a 5% chance of coming up 8 and a 5% chance of coming up 1, so in principle this could just be a "bad bust". It is a bit worrying, and perhaps reason to increase surveillance, but I can't see that there's much that can be done with this data.

Carlo

On 4/11/21 2:33 PM, Matthew Lloyd wrote:

I’d be very interested to see a Bayesian reanalysis of the latest data from Israel, perhaps even in combination with the Pfizer data from April 1st:

https://www.medrxiv.org/content/10.1101/2021.04.06.21254882v1 https://www.medrxiv.org/content/10.1101/2021.04.06.21254882v1

“The SARS-CoV-2 pandemic has been raging for over a year, creating global detrimental impact. The BNT162b2 mRNA vaccine has demonstrated high protection levels, yet apprehension exists that several variants of concerns (VOCs) can surmount the immune defenses generated by the vaccines. Neutralization assays have revealed some reduction in neutralization of VOCs B.1.1.7 and B.1.351, but the relevance of these assays in real life remains unclear. Here, we performed a case-control study that examined whether BNT162b2 vaccinees with documented SARS-CoV-2 infection were more likely to become infected with B.1.1.7 or B.1.351 compared with unvaccinated individuals. Vaccinees infected at least a week after the second dose were disproportionally infected with B.1.351 (odds ratio of 8:1). Those infected between two weeks after the first dose and one week after the second dose, were disproportionally infected by B.1.1.7 (odds ratio of 26:10), suggesting reduced vaccine effectiveness against both VOCs under different dosage/timing conditions. Nevertheless, the B.1.351 incidence in Israel to-date remains low and vaccine effectiveness remains high against B.1.1.7, among those fully vaccinated. These results overall suggest that vaccine breakthrough infection is more frequent with both VOCs, yet a combination of mass-vaccination with two doses coupled with non-pharmaceutical interventions control and contain their spread.”

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