CaronLab / MhcVizPipe

A reporting pipeline for visualization of immunopeptidomics MS data.
MIT License
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KeyError: MHC Allele #16

Open CuriousBiologist opened 1 year ago

CuriousBiologist commented 1 year ago

Hi,

Thank you very much for developing this tool and making it available to the public. I installed it via the easy install method on a macbook pro running the latest OS. I am getting the following errors. The KeyError is coming up irrespective of what HLA-II I select. Thank you.

Traceback (most recent call last):
  File "/Users/CB/Desktop/MhcVizPipe/python/lib/python3.9/site-packages/MhcVizPipe/gui.py", line 1022, in run_analysis
    cl_tools.make_binding_predictions()
  File "/Users/CB/Desktop/MhcVizPipe/python/lib/python3.9/site-packages/MhcVizPipe/Tools/cl_tools.py", line 122, in make_binding_predictions
    predictions = netmhcpan.predict_dict()
  File "/Users/CB/Desktop/MhcVizPipe/python/lib/python3.9/site-packages/MhcVizPipe/Tools/netmhcpan_helper.py", line 332, in predict_dict
    predictions[pep][allele]['EL_score'] = self.predictions[netmhc_pep][allele]['el_score']
KeyError: 'HLA-DQA10401-DQB10507'