CarragherLab / cptools2

Running cellprofiler on eddie3 / SGE clusters
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create a log file #26

Open Swarchal opened 6 years ago

Swarchal commented 6 years ago

Inspired by this, it would be nice to create a log of successfully finished jobs. Useful for those jobs that time-out without returning an error.

Can also check the length of the log file after each cellprofiler run, and if this matches the number of tasks then the array-job has successfully finished and can trigger a script that pulls all the csv files into a database.