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CartwrightLab / dawg

Simulating Sequence Evolution
GNU General Public License v2.0
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issues compiling on GNU/Linux #25

Closed stuckyb closed 6 years ago

stuckyb commented 8 years ago

First, thanks for your work on DAWG and for making the source code freely available. I recently tried compiling the 1.2 source on a recent version of Xubuntu GNU/Linux (gcc 5.2.1), and I got "not declared in this scope" errors for two functions: memcpy() and strchr(). To fix this, I added the line

#include <cstring>

to matrix.cpp and output.cpp; this resolved the error messages. I realize that this might already be addressed in the development version of the code, but many users will want to stick with the latest release, so it might be useful to add some documentation somewhere indicating how to fix this problem.

zmertens commented 8 years ago

Thanks for reporting this issue. Out of curiousity, did you build from master or the release ?

stuckyb commented 8 years ago

It was the 1.2 release.

reedacartwright commented 8 years ago

Try compiling from the master branch, the missing header bug was fixed in 59d94fffcfe.