Open yroskov opened 3 years ago
Imported: 14529 spp (13483 in ac19)
CLASSIFICATION https://data.dev.catalogueoflife.org/dataset/2141/classification
TW: https://sfg.taxonworks.org/tasks/nomenclature/browse?taxon_name_id=729924
Note: these names are flagged as "This name is valid/accepted" in TW Summary.
Checklistbank image:
ISSUES (very clean!) https://data.dev.catalogueoflife.org/dataset/2141/issues
Polydrusus cylindrocollis: Gyllenhal, 1834 | synonym of Polydrusus (Conocetus) bardus Gyllenhal, 1834 |
---|---|
peneckei peneckei Reitter, 1894 | synonym of Rhinomias gattereri (Stierlin, 1884) |
quadricollis versicolor Faust, 1887 | synonym of Sitona versicolor (Faust, 1887) |
Subfamily Entiminae imported on dev 2021-05-24: https://data.dev.catalogueoflife.org/dataset/2154/classification
[ ] Imported: 13912 vs 14529 spp in previous ver (13483 in ac19)
[x] Classification: looks OK (subfamily - tribe - subtribe - genus - species
[x] Original combination: OK (i.e. repeated among CoL synonyms)
[ ] Empty taxa: substantial number of "empty" genera in the Tree. Probably, the most impressive example is in the tribe Gonipterini Lacordaire, 1863:
New version (2021-06-11) (subfamily Entiminae) at https://data.catalogueoflife.org/dataset/2316/classification
[x] Imported: 13915 vs 13912 spp in previous ver (13483 in ac19)
[x] Classification: tribes OK
[x] Original combination: OK
[ ] Synonyms:
[ ] Empty taxa: Examples:
Limalophus Scudder, 1893 Sitonites Heer, 1864
tribe Gonipterini Lacordaire, 1863: https://data.catalogueoflife.org/dataset/2316/classification?taxonKey=627033
Polyteles uniformis Heller, 1932 (≡ G uniformis Heller, 1932)
https://data.catalogueoflife.org/dataset/2316/taxon/625791
Polyteles inka Heller, 1932 (≡ G inka Heller, 1932)
https://data.catalogueoflife.org/dataset/2316/taxon/625788
EXPERIMENT ON DEV 2021-06-28
Project Curculio Assembly Dev, 2164: https://data.dev.catalogueoflife.org/catalogue/2164/assembly?assemblyTaxonKey=8b83ebfc-e2f9-446c-b004-afba7098126d
3i Curculio / 3iC: https://data.dev.catalogueoflife.org/dataset/2154/classification WTaxa / wtaxa dev: https://data.dev.catalogueoflife.org/dataset/2135/classification Assembled.
@gdower scripted blocking overlapped genera in WTaxa.
Synced.
So far these genera will need manual blocks: Hypsonotus (yr: left in 3i only), Apotomus (yr: 3 entries, of them 2 in 3i) Panscopus 2 entries Homaleptops 2 entries Cyphus yr: 2 entries Thaptogenius 2 entries Pachyrhynchus 3 entries, of them 2 in 3i, incl. species Pachyrhynchus [SPECIES NOT SPECIFIED] Elytrocheilus 2 entries Rhinomacer 2 entries in 3i Goniorhinus 2 entries Curculionites 2 entries in WTaxa Eurhinus 2 entries
For some reason Syringotypus (yr: left in 3i only) had a duplicate decision, so that might need review as well.
Results look good.
The version of June was imported from localhost to the PROD 2021-06-28: https://data.catalogueoflife.org/catalogue/3/dataset/1166/classification.
ISSUES assessed
[x] Multi Word Epithet, 13. Species with comment "[SPECIES NOT SPECIFIED]" were blocked in CoL. Example: Laparocerus (Laparocerus) [SPECIES NOT SPECIFIED] alticola Machado, 2016 https://data.catalogueoflife.org/catalogue/3/dataset/1166/workbench?facet=rank&facet=issue&facet=status&facet=nomStatus&facet=nameType&facet=field&facet=authorship&facet=authorshipYear&facet=extinct&facet=environment&facet=origin&issue=multi%20word%20epithet&limit=100&offset=0
[x] Partially Parsable Name, 646. There are 646 synonyms with letter "s" between genus and species epithet (example, Lichenophagus s amplificatus Wollaston, 1865). Clearinghouse interpreted them as subspecies. Blocked in CoL
TASKS 2021-06-30
Resolved 2021-06-30:
Synced 2021-06-30
*3i Curculio of 0.32.2 / 2023-04-12**; imported 2023-04-12 from Geoff's laptop
There is empty subtribe Celeuthetina (in Celeuthetini).
There are empty genera inside tribes (full list): †Sitonites Heer, 1864 (in Anypotactini), †Limalophus Scudder, 1893 (in Byrsopagini), †Oligocryptus Carpenter, 1985 (in Eudiagogini), Prepodes Schoenherr, 1840 (in Eustylini), †Tenillus Scudder, 1893 (in Geonemini), Bryaehus Pascoe, 1870 & Minia Pascoe, 1883 (in Gonipterini), Evadodes Blackburn, 1896 (in Leptopiini), Deroconus Jekel, 1856 (in Lordopini), Myociphus Hustache, 1939 & Pterotropis Schoenherr, 1847 (in Naupactini), †Ophryastites Scudder, 1893 (in Ophryastini), Schauenbergia Osella, 1977 (in Pachyrhynchini), Aperitelus Hustache, 1939 & Strictoseneciobius Hustache, 1939 (in Peritelini), Epherina Pascoe, 1869 & †Evopes Scudder, 1893 (in Phyllobiini), †Sitonitellus Carpenter, 1985 (in Sitonini), †Palaeotanymecides Mani, 1947 (in Tanymecini), †Brachymycterus Heyden & Heyden, 1866 (in Typhlorhinini), and 4 empty genera outside of any tribe Deuterostrophus Jekel, 1875, Genavius Osella, 1983, Holcorhinosoma Voss, 1939, Leptorhinus Latreille, 1828.
ISSUES assessed 2023-04-13
Wrong Monomial Case, 4 = BLOCKED for now:
genus, synonym:
†densepunctatus Haupt, 1956
species, synonyms:
oxyops aberrans Lea, 1898
peneckei peneckei Reitter, 1894
quadricollis versicolor Faust, 1887
Multi Word Epithet, 5: Names with portion [species not specified] = BLOCKED https://www.checklistbank.org/catalogue/3/dataset/1166/workbench?facet=rank&facet=issue&facet=status&facet=nomStatus&facet=nameType&facet=field&facet=authorship&facet=authorshipYear&facet=extinct&facet=environment&facet=origin&issue=multi%20word%20epithet&limit=100&offset=0&reverse=false&sortBy=name
Unparsable Authorship, 6: Names with authorstring Saunders &, 1855 = should it be Saunders & Jekel, 1855? https://www.checklistbank.org/catalogue/3/dataset/1166/workbench?facet=rank&facet=issue&facet=status&facet=nomStatus&facet=nameType&facet=field&facet=authorship&facet=authorshipYear&facet=extinct&facet=environment&facet=origin&issue=unparsable%20authorship&limit=100&offset=0
TASKS
Broken decisions, 1186: rematch all = 1042 remain; all deleted
Two different species?: Phyllobius (Alsus) farinosus (Motschulsky V., 1860) Phyllobius (Alsus) farinosus Motschulsky V., 1860
Four species appear twice in the checklist: Laparocerus (Pecoudius) moyanus Machado, 2021 Pachyrhynchus notocruciatus Yoshitake, 2017 Pachyrhynchus yamianus Kano, 1929 Pantorhytes granulatus Heller, 1905
Names (422 synonyms) with portion [GENUS NOT SPECIFIED] = BLOCKED (normal search in workbench)
Resolved 2023-04-13:
Synced 2023-04-13
*3i Curculio of 0.32.2 / 2023-04-17**; re-imported 2023-04-17 from Geoff's laptop AFTER NIkolai's fixes
TASKS
Synced 2023-04-17
*3i Curculio of 0.32.3 / 2023-05-10**; imported 2023-05-10 from Geoff's laptop
[x] Imported: 14368 spp (vs 14318 spp)
[x] Metadata: version corrected 0.32.3 / 2023-05-10 -> May 2023 / 2023-05-10
[x] Classification: OK
[x] Sector: OK, subfamily Entiminae
[x] flag "extinct"
[x] Check for names with portion [GENUS NOT SPECIFIED] (403 synonyms = remain blocked; 107 bare names), [species not specified] (4 accepted spp, 1 synonym = remain blocked)
TASKS
Resolved 2023-05-11:
Synced 2023-05-11
New title "Entiminae: World Entiminae Database"
Entiminae of 0.33.1 / 2023-07-13; imported 2023-07-13 from Geoff's laptop
[x] Imported: 14368 spp (vs 14318 spp)
[x] Metadata: short & full titles changed as "Entiminae: World Entiminae Database"; new authors added; version corrected 0.33.1 / 2023-07-13 -> Jul 2023 / 2023-07-13
[x] Classification: OK
[x] Sector: OK, subfamily Entiminae
[x] flag "extinct"
[x] Check for names with portions [GENUS NOT SPECIFIED], [species not specified]: OK
ISSUES assessed 2023-07-13
TASKS
Resolved 2023-07-13:
Synced 2023-07-13
Entiminae of 0.34.1 / 2023-08-08; imported 2023-08-08 from Geoff's laptop
TASKS
Resolved 2023-08-09:
Synced 2023-08-09
[x] New logo uploaded in CLB 2023-08-17:
[x] Personal metadata updated between 2023-07-31 & 2023-08-11
Entiminae of 0.34.3 / 2023-09-06; imported 2023-09-06 from Geoff's laptop
TASKS
Коля @omias
Resolved 2023-09-08:
Synced 2023-09-08
The 377 synonyms without species epithets is a data issue, findable in the TW project by searching for 'species not specified':
Hi, I'm currently fixing this issue. That is residual data from my old database remaining with incomplete field "original species". Hope it is to be accomplished by the next update at CoL Nikolai
On Tue, Sep 12, 2023 at 2:38 PM Geoff Ower @.***> wrote:
The 377 synonyms without species epithets is a data issue, findable in the TW project by searching for 'species not specified':
[image: image] https://user-images.githubusercontent.com/8573609/267428027-6b8aafa2-46a8-43b5-8506-a9395d4e82e6.png
— Reply to this email directly, view it on GitHub https://github.com/CatalogueOfLife/testing/issues/128#issuecomment-1716234738, or unsubscribe https://github.com/notifications/unsubscribe-auth/AQSCNRMXPST3FA2B6MVOD4LX2CTZ5ANCNFSM45AWNO7Q . You are receiving this because you were mentioned.Message ID: @.***>
Entiminae of 0.34.5 / 2023-10-04; imported 2023-10-04 from Geoff's laptop
TASKS
Resolved 2023-10-05:
Synced 2023-10-05
= FIXED, correct logo re-uploaded 2023-11-01
I see a different green logo today. https://api.checklistbank.org/dataset/1166/logo?size=ORIGINAL
Also in the COL source: https://www.checklistbank.org/dataset/3/source/1166
The last release indeed had the old logo though: https://www.checklistbank.org/dataset/3LR/source/1166 https://api.checklistbank.org/dataset/3LR/logo/source/1166?size=ORIGINAL
Otherwise I cannot see any reason for the old logo to show up. The metadata of the last imported archive by geoff only has this (notice the wrong title):
title: Curculionidae version: 0.34.5 issued: '2023-10-04'
... and settings are to merge metadata, so anything else should remain as it was.
Entiminae of 0.35.2 / 2023-11-08; imported 2023-11-09 from Geoff's laptop
ISSUES assessed 2023-11-09
TASKS no issues
Synced 2023-11-09
Entiminae of 0.36.0 / 2023-12-07; imported 2023-12-07 from Geoff's laptop
TASKS
Resolved 2023-12-08:
Synced 2023-12-08
Entiminae of 0.37.0 / 2024-01-02; imported 2024-01-02 from Geoff's laptop
TASKS
Resolved 2023-01-03:
Synced 2023-01-03
Entiminae of 0.38.1 / 2024-02-06; imported 2024-02-06 from Geoff's laptop
ISSUES assessed 2024-02-14
TASKS
Resolved 2024-02-14:
Synced 2024-02-14
Entiminae of 0.39.0 / 2024-03-08; imported 2024-03-08 from Geoff's laptop
Metrics
ISSUES assessed 2024-03-19
TASKS = no new issues
Synced 2024-03-19
Entiminae of 0.40.3 / 2024-04-18; imported 2024-04-18 from Geoff's laptop
Metrics
TASKS
Resolved 2024-04-19:
Synced 2024-04-19
Entiminae of 0.41.0 / 2024-05-06; imported 2024-05-06 from Geoff's laptop
Metrics
TASKS
Resolved 2024-05-09:
Synced 2024-05-09
Entiminae of 0.41.1 / 2024-06-03; imported 2024-06-03 from Geoff's laptop
Metrics
ISSUES
TASKS
Resolved 2024-06-04:
Synced 2024-06-04
Entiminae of 0.42.0 / 2024-07-05; imported 2024-07-05 from Geoff's laptop
Metrics
TASKS
Resolved 2024-07-16:
Synced 2024-07-16
Entiminae of 0.43.1 / 2024-08-06; imported 2024-08-06 from Geoff's laptop
Metrics
ISSUES assessed 2024-08-07
TASKS
Resolved 2024-08-07:
Synced 2024-08-07
Subfamily Entiminae imported on dev 2021-05-17: https://data.dev.catalogueoflife.org/dataset/2141/classification