WoRMS Actiniaria (former Hexacoral) (id 1176): test report

[yroskov]

Was WoRMS Hexacoral in ac19, now WoRMS Actiniaria id 1176 on prod https://data.catalogueoflife.org/catalogue/3/dataset/1176

• [x] Sector order Actiniaria. Attention: Subclass Hexacorallia was established, other orders in class Anthozoa dropped under Not assigned subclass.

• [ ] Metadata: Big problem. It looks like metadata were not updated from the yaml: at least, title, abstract, license, version, release are different

Geoff: Here's what are in the yaml file:

title: 'World List of Actiniaria'
alias: WoRMS_Actiniaria
description: 'A compilation of publications concerning taxonomy, nomenclature, and geographic distribution of extant hexacorallians - members of cnidarian order Actiniaria (sea anemones in the strict sense)'
organisations: 'Ohio State University; Department of Evolution, Ecology and Organismal Biology (EEOB); Kansas University Natural History Museum'
contact: info@marinespecies.org
authorsAndEditors: 'Daly, M.; Fautin, D.'
geographicScope: Global
taxonomicScope: Actiniaria
code: null
gazetteer: mrgid
license: cc-by-nc
version: 'ver. (03/2021)'
released: '2021-03-01'
website: 'http://www.marinespecies.org'
logo: null
citation: 'Daly, M.; Fautin, D. (2021). World List of Actiniaria. Accessed at  on 2021-03-01'

It's failing to parse because they don't provide the organisations, authorsAndEditors, and contact correctly. I think we need a verbatim version of those Person and Organisation fields where the info is not separated.

• [ ] Khadija: pls change style of all Aliases: no underscore between WoRMS and taxon name: WoRMS Actiniaria

• [x] Alias and Title were changed manually as WoRMS Actiniaria: World List of Actiniaria However, GSD still appears in the Assembly tree and checklist bank as WoRMS Hexacoral. @gdower, can we change short & full name for this GSD on "basic level", not through standard patches?

• [x] Imports: 1162 spp vs 1138 in ac19

[yroskov]

ISSUES (selected only) 2021-03-10

• [ ] Subspecies Assigned, 15 - incorrect software behavior? @mdoering
  https://data.catalogueoflife.org/catalogue/3/dataset/1176/workbench?facet=rank&facet=issue&facet=status&facet=nomStatus&facet=nameType&facet=field&issue=subspecies%20assigned&limit=100&offset=0 All synonyms. Binomial names such as: Actinothoe sancti matthaei (Mc Murrich, 1893) Anthopleura sanctae helenae Carlgren, 1941 Bolocera mc murrichi Kwietniewski, 1898 Sagartia sancti matthaei McMurrich, 1893 etc interpreted as subspecies?

YR: all names blocked.

[yroskov]

TASKS 2021-03-10

Might be interesting for WoRMS authors:

• [ ] SYN-SYN species (diff acc, same auth) https://data.catalogueoflife.org/catalogue/3/dataset/1176/duplicates?acceptedDifferent=true&authorshipDifferent=false&category=binomial&limit=500&minSize=2&mode=STRICT&offset=0&status=synonym

• [ ] SYN-SYN infraspecies (diff acc, same auth) https://data.catalogueoflife.org/catalogue/3/dataset/1176/duplicates?acceptedDifferent=true&authorshipDifferent=false&category=trinomial&limit=500&minSize=2&mode=STRICT&offset=0&status=synonym

Resolved 2021-03-10:

[yroskov]

Not synced yet because of problem with metadata.

Synced 2021-04-02.

[yroskov]

Checks at preview (of 2021-04-05)

Spp 1162 - 1138 = +24

Suborder Nynantheae in the Tree. WoRMS: Suborder Nynantheae accepted as Enthemonae (Collapsed and reorganized by Rodríguez et al. 2014).

Difficult to complete comparison due to many non-basic ranks in the classification and "accepted as" taxa in WoRMS.

[yroskov]

ver 2023-05-01

TASKS

• Broken decisions, 6: all deleted

Resolved 2023-05-08

Re-synced 2023-05-08

[yroskov]

ver 2023-06-01

TASKS

• Broken decisions, 6: all deleted

Resolved 2023-06-06:

Re-synced 2023-06-06