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CellMigrationLab / Fast4DReg

Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/or z-directions.
MIT License
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Error correcting channels in 3D dataset #7

Open smith6jt-cop opened 5 months ago

smith6jt-cop commented 5 months ago

Hello,

I am using Windows 10 with updated version of FIJI 1.54f. Trying to align four channels of a 3D dataset. Here is my setup: image and the error: image

Debug.csv Exception.txt

I can share the images if that would help troubleshoot. All the images are of the same dimensions (17x9969x9487)

jpylvanainen commented 2 months ago

Hi @smith6jt-cop , thanks for your report and I sincerely apologize for the delay. Have you already managed to solve your issue?

I would be happy try if I can reproduce your error with your images to pinpoint where the issue is. I suspect that your datasets are most likely very large in size. You could try to use the RAM saving mode (tick box in the UI).