LeeKamentsky
commented
8 years ago It turns out to require more work than I thought. Part of the process of creating placeholders for the tasks involves knowing the UGER job number. You don't know the job number until you submit the job, so the database can't be properly populated and the parts of the script that report status ("running" / "done") will not work.
Mark and David would like a new checkbox on the BatchProfiler page (e.g. "Generate scripts only") which would, instead of submitting the jobs as imageweb and getting the nice web interface, simply output the qsub commands that would have been submitted. Then it would be up to us to execute the jobs (and get our personal fairshare) and monitor them manually.