CellProfiler / CellProfiler-Analyst

Open-source software for exploring and analyzing large, high-dimensional image-derived data.
http://cellprofileranalyst.org
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Issues/310 (visualization of 3D datasets in CPA) #313

Closed rsenft1 closed 2 years ago

rsenft1 commented 3 years ago

Fixes #310 by allowing visualization of image stacks depending on the mid-point of a particular object or image in z. Changed classifier, image gallery, and image reading/tile fetching functions to allow 3D images to be read with a specific z plane depending on the midpoint of an object or image in z.

Tested w/ 2D (translocation) and 3D (monolayer) datasets.

This pull request is more up to date than #312 (I couldn't change this because a collaborator may need to use that specific version). Specifically, this PR fixes issues with Image Gallery that were present in #312. To my knowledge, there aren't further bugs that need squashing in this version.