Open bethac07 opened 2 years ago
I am currently running into something similar with exporttodatabase. When I check the database file however it is empty. With some fiddling I got one of my batches to show some data. I noticed at the beginning of the run in an output file it says that the table exporting to my database already exists. I am running multiple batches, and I think the file is either being overwritten or stopped from being written because the tables exported all have the same name.
I am also adding a screenshot of the output file I have generated.
I also found this post describing something similar to what I am seeing here:
https://forum.image.sc/t/nointeractionexception-in-exporttodatabase-with-sqlite/88579
I am running the omnipose plugin not cellpose but I believe that it is just a model within the cellpose feature.
H/T the forum. CellProfiler is running but not disengaging nicely. Can anyone verify?