Open tamkaho opened 4 years ago
I have some tiffs with >3 channels which opens fine with imagej's bioformat. However if I open them with bioformats I keep getting 3 channels no matter what I put into c (as below). The tiffs are pyramidal tiled tiffs created with vips.
reader = bioformats.ImageReader("file.tif") info = bioformats.get_omexml_metadata(path="file.tif") o = bioformats.OMEXML(info) o.image().Pixels.SizeC >> 5 reader.read().shape >> 3 reader.read(c=1).shape >> 3 reader.read(c="anything").shape >> 3
I have some tiffs with >3 channels which opens fine with imagej's bioformat. However if I open them with bioformats I keep getting 3 channels no matter what I put into c (as below). The tiffs are pyramidal tiled tiffs created with vips.