Cellular-Semantics / CL_KG

Building a Cell Ontology Knowledge-Base from data, and LLMs
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Curation issue in Curated_data_KG_Mo_Group - KG sheet #46

Open ubyndr opened 1 week ago

ubyndr commented 1 week ago

In Curated_data_KG_Mo_Group - KG.csv following lines do not seem to be correct. The datasets do not have author cell types, but they also don't have standard cell_type field.

@JABelfiore can you please have a look at it?

cc @dosumis

Dataset (indv datasets within larger group) Full name dataset (top of page) CxG Link h5ad link Reference_DOI Bionetworks reference Standard category present? (T/F) Standard category cell_type present? (T/F) Author Category Cell Type Field Name Content Value type(s) Notes Study Short Name CxG Dataset Collection X Is the dataset Normal or Normal/Diseased Stage
Human dermal fibroblast atlas Human and mouse dermal fibroblast atlas CXG H5AD T T Collection Normal Adult
Mouse dermal fibroblast atlas Human and mouse dermal fibroblast atlas CXG H5AD T T Collection Normal Adult