reads CSV input - detailing datasets and author_category fields (CSV to be provided by @dosumis)
Pulls Anndata file from Census
Runs Pandasaurus to generate RDF
Run OBASK,
importing all output RDF files from step 1.
Ontologies: CL; GO; Uberon
The process is almost fully automated. User need to prepare the file list for their owl files generated via anndata2rdf container and add them to collectdata full_ontologies files.
Resolves #1
Currently we have the following;
The process is almost fully automated. User need to prepare the file list for their owl files generated via anndata2rdf container and add them to collectdata full_ontologies files.
i.e.