Error: 'temp_o' is not defined

ChangLab / ATACPrimerTool

Primer design for ATAC-qPCR

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Error: 'temp_o' is not defined #6

Open rahulk87 opened 3 years ago

rahulk87 commented 3 years ago

Hi, I am using this tool and getting the following error:

NameError: name 'temp_o' is not defined

Code is working fine on example dataset provided with software but not on our dataset. Any clue why it is not working would be very helpful.

Thanks!!

katieyost commented 3 years ago

Can you send the command you used? Thanks!

huipan1973 commented 9 months ago

Same issue

The comand I ran: python /home/panh/ATACPrimerTool/pipelines/ATACPrimerTool.py -O APT_res -S KCTD17_promoter -G hg38 -I noorg_bam -B SRR7585374_KCTD17_promoter_peak.bed -fasta /n/jobspace/bbcore/ucsc_genome/hg38/hg38.fa -cor 0.8