Open JasperVanDenBosch opened 4 years ago
data loaded Optimising HRF... optimising hrf :1 --------------------------------------------------------------------------- ValueError Traceback (most recent call last) <ipython-input-7-36da088ea53a> in <module> 7 design = [pandas.read_csv(f, delimiter='\t') for f in event_files] 8 gd = GLMdenoise(params=params) ----> 9 gd.fit(design, data, TR) 10 gd.plot_figures(out.create_report()) 11 for image_name in ['pseudo_t_stats']: /usr/local/miniconda/lib/python3.7/site-packages/glmdenoise/pyGlmdenoise.py in fit(self, design, data, tr) 100 self.tr, 101 self.params['hrf'], --> 102 polymatrix) 103 whitened_design = None 104 whitened_data = None /usr/local/miniconda/lib/python3.7/site-packages/glmdenoise/utils/optimiseHRF.py in optimiseHRF(design, data, tr, hrfknobs, combinedmatrix, numforhrf, hrfthresh, hrffitmask) 402 403 # stack design across runs --> 404 stackdesign = np.vstack(convdesign) 405 406 # estimate the amplitudes (output: conditions x voxels) /usr/local/miniconda/lib/python3.7/site-packages/numpy/core/shape_base.py in vstack(tup) 232 233 """ --> 234 return _nx.concatenate([atleast_2d(_m) for _m in tup], 0) 235 236 def hstack(tup): ValueError: all the input array dimensions except for the concatenation axis must match exactly
i'm also getting this error.