Concerning the issue#156, I added 2 new unit tests in test/preparation/test_protonate.py on _fix_pybel_output and protonate_ligand_with_pybel in preparation.protonate.
By the way, an update to the environment.yml to improve the convenience of environment configuration is also committed.
Dear colleagues,
Concerning the issue#156, I added 2 new unit tests in
test/preparation/test_protonate.py
on_fix_pybel_output
andprotonate_ligand_with_pybel
inpreparation.protonate
.By the way, an update to the
environment.yml
to improve the convenience of environment configuration is also committed.Best, Yinjie.