Chicago / west-nile-virus-predictions

Algorithm to predict repeated positive results for West Nile Virus for mosquitoes captured in traps across Chicago.
MIT License
14 stars 1 forks source link

Graphs and images #45

Open tomschenkjr opened 7 years ago

tomschenkjr commented 7 years ago

When writing the one-pager, we will need to create some graphs and use images as part of the content. The graphs should be able to:

tomschenkjr commented 7 years ago

I like this image as a potential banner image if it has a slight blur. The green color is #c4d954 and its color compliment is #d954c5, which fits DoIT's color scheme.

geneorama commented 7 years ago

It's a great picture, but it's a dragonfly, right?

tomschenkjr commented 7 years ago

Hrm, you’re right. Ok, need another option.

geneorama commented 7 years ago

The best options I've found are from the Illinois Department of Public Health http://www.idph.state.il.us/envhealth/wnv_photos/wnv_photos.htm

image

They also have good pictures of traps image

Although I also contacted the John W. Hock Company in Florida yesterday and received permission to use their photos in the presentation: http://johnwhock.com/products/mosquito-sandfly-traps/cdc-gravid-trap/

image

RaedMan commented 7 years ago

The CDC has a Public Health Image Library with a lot of mosquito photos too, if interested: https://phil.cdc.gov/phil/home.asp

geneorama commented 7 years ago

@RaedMan nice, there's a VERY detailed mosquito picture there with similar colors to the first picture @tomschenkjr shared. This is a screen grab of it, it's a 16MB TIF file.

image

tomschenkjr commented 7 years ago

cc'ing @ThorSean

tomschenkjr commented 7 years ago

Also, in a conversation with @levyj, he mentioned that images of people in a lab may also convey some useful information.

geneorama commented 7 years ago

@tomschenkjr how about this for the lab? image @RaedMan sent me that a while back. I've never gotten into the lab!

geneorama commented 7 years ago

There's a trove of photos on the philly site, such as this inflamed equine brain tissue (inflamed from WNV) image

geneorama commented 7 years ago

@tomschenkjr

What do you think about this graph? This is the top ten states for total reported WNV cases, Illinois is the thick line.

I like that it shows how random the infections can be. Although infection rates are rarely above 1/100,000 sometimes there can be a spikes. For example, Colorado and Nebraska have gotten hammered in the past, so there's nothing to suggest that it can't happen in Illinois.

image

tomschenkjr commented 7 years ago

I think there are too many states being displayed. Agreed that Illinois, Colorado and Nebraska are interesting illustrations. I’d recommend paring it down—if you have access to the raw data—to just those three states. Otherwise, it’s showing too much noise in the background of the main thesis of the graph.

geneorama commented 7 years ago

Top 5?

image

tomschenkjr commented 7 years ago

That can work. The narrative is clearer in this context.

RaedMan commented 7 years ago

Regarding my pics of the lab I sent to @geneorama, I have no problem with publishing them as long as the vector program is okay with using them. I think I sent you all of them already, but let me know.

geneorama commented 7 years ago

Actually, I doubt that will make it in anyway. Trying to keep it short.